Search for normalized transcriptome data

Find the data you need

Search the multi-organism collection of genome wide gene expression data obtained from publicly available sources like GEO, ArrayExpress, and SRA. The data has been processed uniformly and normalized using a set of standardized pipelines curated by the Childhood Cancer Data Lab (CCDL)

Create custom datasets

Build and download custom datasets tailored to your needs including gene expression matrices and sample metadata.

You can use refine.bio datasets for preliminary assessment of biological signals and to accelerate validation of your research findings.

Get Started using refine.bio data

Explore the different ways you can use refine.bio data to help with your scientific questions.

Differential Expression Analysis

Learn how you can do differential expression analysis with refine.bio datasets.

Pathway Analysis

Learn how you can use refine.bio data to identify pathways that are active in your biological condition of interest.

refine.bio Compendia

refine.bio compendia are collections of samples that have been processed and packaged for broad and felxible use.

Explore the docs

Learn about how we source and process data and other downstream analyses you can do with refine.bio data.

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